Atomistry » Caesium » PDB 6dzo-7jmq » 7abm
Atomistry »
  Caesium »
    PDB 6dzo-7jmq »
      7abm »

Caesium in PDB 7abm: X-Ray Structure of Phosphorylated Barrier-to-Autointegration Factor (Baf)

Protein crystallography data

The structure of X-Ray Structure of Phosphorylated Barrier-to-Autointegration Factor (Baf), PDB code: 7abm was solved by S.Zinn-Justin, A.Marcelot, M.H.Le Du, V.Ropars, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.16 / 3.00
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 70.32, 70.32, 40.625, 90, 90, 120
R / Rfree (%) 19.6 / 32.6

Caesium Binding Sites:

The binding sites of Caesium atom in the X-Ray Structure of Phosphorylated Barrier-to-Autointegration Factor (Baf) (pdb code 7abm). This binding sites where shown within 5.0 Angstroms radius around Caesium atom.
In total 2 binding sites of Caesium where determined in the X-Ray Structure of Phosphorylated Barrier-to-Autointegration Factor (Baf), PDB code: 7abm:
Jump to Caesium binding site number: 1; 2;

Caesium binding site 1 out of 2 in 7abm

Go back to Caesium Binding Sites List in 7abm
Caesium binding site 1 out of 2 in the X-Ray Structure of Phosphorylated Barrier-to-Autointegration Factor (Baf)


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 1 of X-Ray Structure of Phosphorylated Barrier-to-Autointegration Factor (Baf) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs101

b:140.4
occ:1.00
O A:ARG37 3.0 45.2 1.0
CE1 A:PHE39 3.7 38.0 1.0
O A:GLY38 4.1 40.3 1.0
CA A:GLY38 4.1 41.5 1.0
CD1 A:PHE39 4.1 37.5 1.0
C A:ARG37 4.1 44.7 1.0
CZ A:PHE39 4.2 37.6 1.0
C A:GLY38 4.2 40.1 1.0
N A:GLY38 4.6 42.6 1.0
N A:PHE39 5.0 38.6 1.0
CG A:PHE39 5.0 37.0 1.0
CE2 A:PHE39 5.0 37.8 1.0

Caesium binding site 2 out of 2 in 7abm

Go back to Caesium Binding Sites List in 7abm
Caesium binding site 2 out of 2 in the X-Ray Structure of Phosphorylated Barrier-to-Autointegration Factor (Baf)


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 2 of X-Ray Structure of Phosphorylated Barrier-to-Autointegration Factor (Baf) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs102

b:216.4
occ:1.00
O A:ALA87 3.4 93.5 1.0
C A:ALA87 4.0 93.3 1.0
O A:ASP86 4.2 92.4 1.0
CA A:ALA87 4.4 92.6 1.0
O A:HOH203 4.4 46.4 1.0
C A:ASP86 4.8 92.1 1.0
N A:ALA87 4.9 92.0 1.0
N A:PHE88 4.9 93.5 1.0

Reference:

A.Marcelot, A.Petitalot, V.Ropars, M.H.Le Du, C.Samson, S.Dubois, G.Hoffmann, S.Miron, P.Cuniasse, J.A.Marquez, R.Thai, F.X.Theillet, S.Zinn-Justin. Di-Phosphorylated Baf Shows Altered Structural Dynamics and Binding to Dna, But Interacts with Its Nuclear Envelope Partners. Nucleic Acids Res. V. 49 3841 2021.
ISSN: ESSN 1362-4962
PubMed: 33744941
DOI: 10.1093/NAR/GKAB184
Page generated: Tue Jul 30 21:03:43 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy