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Caesium in PDB 6wcc: Human Closed State TMEM175 in Cscl

Caesium Binding Sites:

The binding sites of Caesium atom in the Human Closed State TMEM175 in Cscl (pdb code 6wcc). This binding sites where shown within 5.0 Angstroms radius around Caesium atom.
In total 5 binding sites of Caesium where determined in the Human Closed State TMEM175 in Cscl, PDB code: 6wcc:
Jump to Caesium binding site number: 1; 2; 3; 4; 5;

Caesium binding site 1 out of 5 in 6wcc

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Caesium binding site 1 out of 5 in the Human Closed State TMEM175 in Cscl


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 1 of Human Closed State TMEM175 in Cscl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs701

b:0.2
occ:1.00
HB2 A:ALA263 2.9 37.1 1.0
CS B:CS701 3.5 0.2 1.0
HB1 A:ALA263 3.6 37.1 1.0
CB A:ALA263 3.7 37.1 1.0
HB3 B:SER38 3.9 39.4 1.0
HB3 A:SER38 3.9 39.3 1.0
HG B:SER38 3.9 39.4 1.0
HA A:ALA263 4.0 37.1 1.0
HG A:SER38 4.1 39.3 1.0
O A:HOH802 4.2 40.0 1.0
OG A:SER38 4.2 39.3 1.0
HG2 A:GLU259 4.4 41.0 1.0
HG3 A:GLU259 4.4 41.0 1.0
CA A:ALA263 4.4 37.1 1.0
HB3 A:ALA263 4.4 37.1 1.0
OG B:SER38 4.5 39.4 1.0
CB A:SER38 4.5 39.3 1.0
CB B:SER38 4.5 39.4 1.0
HB2 B:SER38 4.7 39.4 1.0
OE2 A:GLU259 4.7 41.0 1.0
HA A:SER38 4.8 39.3 1.0
CG A:GLU259 4.8 41.0 1.0
H A:ALA263 4.9 37.1 1.0
N A:ALA263 5.0 37.1 1.0
O A:GLU259 5.0 41.0 1.0

Caesium binding site 2 out of 5 in 6wcc

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Caesium binding site 2 out of 5 in the Human Closed State TMEM175 in Cscl


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 2 of Human Closed State TMEM175 in Cscl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs702

b:0.7
occ:1.00
O A:HOH802 3.2 40.0 1.0
HA2 A:GLY267 3.3 32.3 1.0
HB2 A:ALA42 3.4 37.2 1.0
HA3 A:GLY267 3.4 32.3 1.0
HB2 B:ALA42 3.4 37.0 1.0
H A:GLY267 3.4 32.3 1.0
HA A:ALA42 3.4 37.2 1.0
O A:ALA263 3.5 37.1 1.0
N A:GLY267 3.6 32.3 1.0
CA A:GLY267 3.6 32.3 1.0
HB1 B:ALA42 3.7 37.0 1.0
CS B:CS702 3.8 0.2 1.0
HB2 A:ASP266 3.8 34.1 1.0
HB1 A:ALA42 3.9 37.2 1.0
HG A:SER45 4.0 33.7 1.0
CB B:ALA42 4.0 37.0 1.0
CB A:ALA42 4.0 37.2 1.0
O B:HOH802 4.0 40.5 1.0
CA A:ALA42 4.1 37.2 1.0
HB1 A:ALA263 4.2 37.1 1.0
HB3 B:ALA42 4.4 37.0 1.0
C A:ASP266 4.4 34.1 1.0
HA A:ALA263 4.4 37.1 1.0
C A:ALA263 4.4 37.1 1.0
HB3 A:ASP266 4.5 34.1 1.0
CB A:ASP266 4.5 34.1 1.0
OG A:SER45 4.7 33.7 1.0
N A:ALA42 4.7 37.2 1.0
CA A:ALA263 4.8 37.1 1.0
HB3 A:ALA42 4.9 37.2 1.0
H A:ALA42 4.9 37.2 1.0
CB A:ALA263 5.0 37.1 1.0

Caesium binding site 3 out of 5 in 6wcc

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Caesium binding site 3 out of 5 in the Human Closed State TMEM175 in Cscl


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 3 of Human Closed State TMEM175 in Cscl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs703

b:0.3
occ:1.00
HD11 A:LEU53 3.6 49.1 1.0
HD11 B:LEU53 3.7 49.0 1.0
HD13 B:LEU278 3.9 46.4 1.0
HD13 A:LEU53 3.9 49.1 1.0
HD13 A:LEU278 3.9 46.6 1.0
HD13 B:LEU53 4.0 49.0 1.0
HD21 A:LEU53 4.1 49.1 1.0
HD21 B:LEU53 4.1 49.0 1.0
CD1 A:LEU53 4.2 49.1 1.0
CD1 B:LEU53 4.3 49.0 1.0
HD23 A:LEU275 4.6 41.3 1.0
HD23 B:LEU275 4.7 41.4 1.0
CD1 B:LEU278 4.7 46.4 1.0
HD11 B:LEU278 4.7 46.4 1.0
CD1 A:LEU278 4.7 46.6 1.0
HD22 A:LEU53 4.7 49.1 1.0
HD11 A:LEU278 4.7 46.6 1.0
HD21 A:LEU275 4.7 41.3 1.0
HD22 B:LEU53 4.7 49.0 1.0
HD21 B:LEU275 4.8 41.4 1.0
CD2 A:LEU53 4.8 49.1 1.0
CD2 B:LEU53 4.8 49.0 1.0
HD12 A:LEU53 4.9 49.1 1.0
HD12 B:LEU278 4.9 46.4 1.0
HD12 A:LEU278 4.9 46.6 1.0
HD12 B:LEU53 5.0 49.0 1.0

Caesium binding site 4 out of 5 in 6wcc

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Caesium binding site 4 out of 5 in the Human Closed State TMEM175 in Cscl


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 4 of Human Closed State TMEM175 in Cscl within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cs701

b:0.2
occ:1.00
HB2 B:ALA263 2.9 36.9 1.0
CS A:CS701 3.5 0.2 1.0
HB1 B:ALA263 3.6 36.9 1.0
CB B:ALA263 3.7 36.9 1.0
HB3 A:SER38 3.9 39.3 1.0
HB3 B:SER38 3.9 39.4 1.0
HG A:SER38 3.9 39.3 1.0
HA B:ALA263 4.0 36.9 1.0
HG B:SER38 4.1 39.4 1.0
O B:HOH802 4.2 40.5 1.0
OG B:SER38 4.2 39.4 1.0
HG2 B:GLU259 4.4 40.9 1.0
HG3 B:GLU259 4.4 40.9 1.0
CA B:ALA263 4.4 36.9 1.0
HB3 B:ALA263 4.4 36.9 1.0
OG A:SER38 4.5 39.3 1.0
CB B:SER38 4.5 39.4 1.0
CB A:SER38 4.5 39.3 1.0
HB2 A:SER38 4.7 39.3 1.0
OE2 B:GLU259 4.7 40.9 1.0
HA B:SER38 4.8 39.4 1.0
CG B:GLU259 4.8 40.9 1.0
H B:ALA263 4.9 36.9 1.0
N B:ALA263 5.0 36.9 1.0
O B:GLU259 5.0 40.9 1.0

Caesium binding site 5 out of 5 in 6wcc

Go back to Caesium Binding Sites List in 6wcc
Caesium binding site 5 out of 5 in the Human Closed State TMEM175 in Cscl


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 5 of Human Closed State TMEM175 in Cscl within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cs702

b:0.2
occ:1.00
O B:HOH802 3.2 40.5 1.0
HA2 B:GLY267 3.3 32.0 1.0
HB2 B:ALA42 3.4 37.0 1.0
HA3 B:GLY267 3.4 32.0 1.0
HB2 A:ALA42 3.4 37.2 1.0
H B:GLY267 3.4 32.0 1.0
HA B:ALA42 3.4 37.0 1.0
O B:ALA263 3.5 36.9 1.0
N B:GLY267 3.6 32.0 1.0
CA B:GLY267 3.6 32.0 1.0
HB1 A:ALA42 3.7 37.2 1.0
CS A:CS702 3.8 0.7 1.0
HB2 B:ASP266 3.8 34.0 1.0
HB1 B:ALA42 3.9 37.0 1.0
CB A:ALA42 3.9 37.2 1.0
HG B:SER45 4.0 33.4 1.0
CB B:ALA42 4.0 37.0 1.0
O A:HOH802 4.0 40.0 1.0
CA B:ALA42 4.1 37.0 1.0
HB1 B:ALA263 4.2 36.9 1.0
HB3 A:ALA42 4.3 37.2 1.0
C B:ASP266 4.4 34.0 1.0
HA B:ALA263 4.4 36.9 1.0
C B:ALA263 4.4 36.9 1.0
HB3 B:ASP266 4.5 34.0 1.0
CB B:ASP266 4.5 34.0 1.0
OG B:SER45 4.7 33.4 1.0
N B:ALA42 4.7 37.0 1.0
CA B:ALA263 4.8 36.9 1.0
HB3 B:ALA42 4.9 37.0 1.0
H B:ALA42 4.9 37.0 1.0
CB B:ALA263 5.0 36.9 1.0

Reference:

S.Oh, N.Paknejad, R.K.Hite. Gating and Selectivity Mechanisms For the Lysosomal K+Channel TMEM175. Elife V. 9 2020.
ISSN: ESSN 2050-084X
PubMed: 32228865
DOI: 10.7554/ELIFE.53430
Page generated: Sun Dec 13 10:57:20 2020

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