Caesium in PDB 7dil: Structure of PFGRX1 with Cesium

The structure of Structure of PFGRX1 with Cesium, PDB code: 7dil was solved by Y.Manickam, A.Sharma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.17 / 1.71
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	48.331, 48.331, 82.993, 90, 90, 120
R / Rfree (%)	16 / 18.9

The binding sites of Caesium atom in the Structure of PFGRX1 with Cesium (pdb code 7dil). This binding sites where shown within 5.0 Angstroms radius around Caesium atom.
In total 8 binding sites of Caesium where determined in the Structure of PFGRX1 with Cesium, PDB code: 7dil:
Jump to Caesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Caesium binding site 1 out of 8 in the Structure of PFGRX1 with Cesium


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 1 of Structure of PFGRX1 with Cesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Cs203 b:22.1 occ:0.74 O A:MET48 3.0 19.4 1.0 O A:ASN45 3.0 24.3 1.0 OD1 A:ASN45 3.2 49.5 1.0 O A:HOH398 3.6 35.8 1.0 CG A:ASN45 3.7 45.5 1.0 O A:HOH363 3.8 21.3 1.0 O A:HOH386 3.8 23.6 1.0 ND2 A:ASN45 3.9 55.4 1.0 C A:MET48 4.1 19.7 1.0 C A:ASN45 4.1 21.8 1.0 O A:HOH307 4.3 21.1 0.5 CB A:MET48 4.7 26.2 1.0 CA A:ASN45 4.7 24.9 1.0 N A:MET48 4.7 19.2 1.0 CA A:MET48 4.8 20.6 1.0 CB A:ASN45 4.8 30.4 1.0

Caesium binding site 2 out of 8 in the Structure of PFGRX1 with Cesium


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 2 of Structure of PFGRX1 with Cesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Cs204 b:33.1 occ:0.37 O A:HOH420 3.0 33.9 0.4 O A:GLY41 3.2 27.6 1.0 O A:HOH436 3.6 47.3 1.0 CE1 A:TYR42 3.7 27.9 1.0 CD1 A:TYR42 3.7 22.5 1.0 CZ A:TYR42 3.7 24.9 1.0 CG A:TYR42 3.7 21.0 1.0 C A:GLY41 3.7 23.6 1.0 CE2 A:TYR42 3.8 21.8 1.0 CD2 A:TYR42 3.8 20.5 1.0 O A:HOH395 4.0 31.6 0.5 N A:TYR42 4.1 20.6 1.0 CA A:TYR42 4.1 18.8 1.0 O A:HOH365 4.3 42.3 0.8 OH A:TYR42 4.4 32.8 1.0 O A:HOH420 4.4 31.7 0.6 CB A:TYR42 4.5 21.1 1.0 O A:HOH445 4.6 55.7 1.0 O A:HOH395 4.7 29.1 0.6 CA A:GLY41 4.7 21.3 1.0 O A:HOH413 4.8 44.3 1.0

Caesium binding site 3 out of 8 in the Structure of PFGRX1 with Cesium


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 3 of Structure of PFGRX1 with Cesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Cs205 b:33.8 occ:0.33 O A:HOH403 2.9 45.8 1.0 O A:HOH428 3.1 37.1 1.0 O A:ASN95 3.1 18.7 1.0 O A:HOH336 3.2 30.2 1.0 OD1 A:ASN95 3.5 21.8 1.0 O A:HOH395 3.5 29.1 0.6 OH A:TYR42 3.9 32.8 1.0 CG A:ASN95 4.0 23.5 1.0 C A:ASN95 4.0 18.0 1.0 O A:HOH372 4.2 26.3 1.0 ND2 A:ASN95 4.2 24.4 1.0 N A:ASP96 4.7 19.3 1.0 CA A:ASN95 4.7 18.8 1.0 CA A:ASP96 4.7 18.9 1.0 CB A:ASN95 4.9 16.8 1.0

Caesium binding site 4 out of 8 in the Structure of PFGRX1 with Cesium


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 4 of Structure of PFGRX1 with Cesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Cs206 b:64.3 occ:0.28 CS A:CS206 0.0 64.3 0.3 CS A:CS206 2.1 55.3 0.3 OD1 A:ASN43 3.2 36.5 0.4 O A:HOH387 3.2 29.4 1.0 OD1 A:ASN43 3.4 40.3 0.6 O A:LYS40 3.8 23.9 1.0 CG A:ASN43 4.2 32.1 0.4 CA A:ASN43 4.3 22.1 0.4 CA A:ASN43 4.3 21.1 0.6 CG A:ASN43 4.3 33.4 0.6 CB A:ASN43 4.6 26.6 0.4 CB A:ASN43 4.6 26.3 0.6 C A:LYS40 4.9 18.6 1.0 N A:ASN43 4.9 24.1 1.0

Caesium binding site 5 out of 8 in the Structure of PFGRX1 with Cesium


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 5 of Structure of PFGRX1 with Cesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Cs206 b:55.3 occ:0.32 CS A:CS206 0.0 55.3 0.3 CS A:CS206 2.1 64.3 0.3 O A:LYS40 3.2 23.9 1.0 OD1 A:ASN43 3.3 36.5 0.4 C A:LYS40 4.1 18.6 1.0 O A:HOH387 4.4 29.4 1.0 CG A:ASN43 4.5 32.1 0.4 CA A:GLY41 4.5 21.3 1.0 N A:GLY41 4.7 21.6 1.0 OD1 A:ASN43 4.9 40.3 0.6 CA A:ASN43 4.9 22.1 0.4 CA A:ASN43 4.9 21.1 0.6 N A:ASN43 4.9 24.1 1.0 C A:GLY41 5.0 23.6 1.0

Caesium binding site 6 out of 8 in the Structure of PFGRX1 with Cesium


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 6 of Structure of PFGRX1 with Cesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Cs207 b:40.2 occ:0.33 O A:HOH426 2.7 41.3 0.7 O A:PRO57 3.1 22.4 1.0 O A:HOH310 3.7 43.2 0.9 C A:PRO57 4.0 19.4 1.0 CB A:PRO57 4.0 23.0 1.0 CA A:PRO57 4.2 19.4 1.0 O A:HOH343 4.3 25.4 1.0 O A:HOH360 4.9 37.6 1.0

Caesium binding site 7 out of 8 in the Structure of PFGRX1 with Cesium


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 7 of Structure of PFGRX1 with Cesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Cs208 b:43.7 occ:0.30 O A:HOH417 3.0 43.1 1.0 O A:GLY108 3.2 26.9 1.0 C A:GLY108 4.0 25.4 1.0 CA A:GLY108 4.0 27.6 1.0

Caesium binding site 8 out of 8 in the Structure of PFGRX1 with Cesium


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 8 of Structure of PFGRX1 with Cesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Cs209 b:43.1 occ:0.31 O A:ASN81 3.0 20.2 1.0 O A:HOH422 3.1 49.9 1.0 O A:HOH419 3.2 52.5 1.0 OD1 A:ASP83 3.2 30.0 0.7 OD2 A:ASP83 3.7 40.5 0.7 CG A:ASP83 3.7 30.5 0.7 O A:HOH414 3.9 34.3 0.6 ND2 A:ASN81 3.9 29.7 1.0 C A:ASN81 4.2 20.2 1.0 CG A:ASN81 4.4 25.0 1.0 CB A:LYS82 4.6 19.2 1.0 N A:ASP83 4.6 17.4 1.0 O A:HOH393 4.7 54.3 1.0 CE A:LYS82 4.8 30.4 1.0 O A:HOH367 4.8 48.7 1.0 CB A:ASN81 4.8 23.1 1.0 C A:LYS82 4.9 21.7 1.0 OD1 A:ASN81 4.9 27.8 1.0 CB A:ASP83 4.9 20.4 0.3 CB A:ASP83 5.0 18.4 0.7

Y.Manickam, A.Sharma. Interaction of Metals with PFGRX1 To Be Published.