Caesium in PDB 6od9: Co-Crystal Structure of the Fusobacterium Ulcerans Ztp Riboswitch Using An X-Ray Free-Electron Laser

The structure of Co-Crystal Structure of the Fusobacterium Ulcerans Ztp Riboswitch Using An X-Ray Free-Electron Laser, PDB code: 6od9 was solved by C.P.Jones, B.Tran, A.R.Ferre-D'amare, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.19 / 4.10
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	92.740, 92.740, 120.480, 90.00, 90.00, 120.00
R / Rfree (%)	25.8 / 30.8

The structure of Co-Crystal Structure of the Fusobacterium Ulcerans Ztp Riboswitch Using An X-Ray Free-Electron Laser also contains other interesting chemical elements:

Magnesium	(Mg)	2 atoms
Potassium	(K)	5 atoms

The binding sites of Caesium atom in the Co-Crystal Structure of the Fusobacterium Ulcerans Ztp Riboswitch Using An X-Ray Free-Electron Laser (pdb code 6od9). This binding sites where shown within 5.0 Angstroms radius around Caesium atom.
In total 2 binding sites of Caesium where determined in the Co-Crystal Structure of the Fusobacterium Ulcerans Ztp Riboswitch Using An X-Ray Free-Electron Laser, PDB code: 6od9:
Jump to Caesium binding site number: 1; 2;

Caesium binding site 1 out of 2 in the Co-Crystal Structure of the Fusobacterium Ulcerans Ztp Riboswitch Using An X-Ray Free-Electron Laser


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 1 of Co-Crystal Structure of the Fusobacterium Ulcerans Ztp Riboswitch Using An X-Ray Free-Electron Laser within 5.0Å range: probe atom residue distance (Å) B Occ A:Cs105 b:0.5 occ:1.00 N7 A:G25 3.2 74.1 1.0 O6 A:G25 3.7 83.9 1.0 OP2 A:G17 4.0 63.1 1.0 C5 A:G25 4.1 86.1 1.0 C8 A:G25 4.2 71.3 1.0 C6 A:G25 4.3 80.8 1.0 OP2 A:A18 4.5 29.7 1.0 OP2 A:G25 4.6 95.7 1.0 OP1 A:G17 4.7 40.1 1.0 P A:G17 4.8 41.7 1.0

Caesium binding site 2 out of 2 in the Co-Crystal Structure of the Fusobacterium Ulcerans Ztp Riboswitch Using An X-Ray Free-Electron Laser


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 2 of Co-Crystal Structure of the Fusobacterium Ulcerans Ztp Riboswitch Using An X-Ray Free-Electron Laser within 5.0Å range: probe atom residue distance (Å) B Occ B:Cs106 b:81.0 occ:1.00 N7 B:G25 3.3 38.9 1.0 O6 B:G25 4.1 42.6 1.0 OP2 B:G25 4.1 47.1 1.0 C8 B:G25 4.2 35.6 1.0 C5 B:G25 4.3 45.9 1.0 OP2 B:G17 4.5 29.6 1.0 C6 B:G25 4.6 46.5 1.0 OP2 B:A18 4.7 22.1 1.0 OP1 B:G17 4.9 32.6 1.0

C.Jones, B.Tran, C.Conrad, J.Stagno, R.Trachman 3Rd, P.Fischer, A.Meents, A.Ferre-D'amare. Co-Crystal Structure of the Fusobacterium Ulcerans Ztp Riboswitch Using An X-Ray Free-Electron Laser. Acta Crystallogr.,Sect.F V. 75 496 2019.
ISSN: ESSN 2053-230X
PubMed: 31282869
DOI: 10.1107/S2053230X19008549