Caesium in PDB 2fg8: Structure of Human Ferritin L Chain
Protein crystallography data
The structure of Structure of Human Ferritin L Chain, PDB code: 2fg8
was solved by
Z.M.Wang,
C.Li,
M.P.Ellenburg,
J.R.Ruble,
J.X.Ho,
D.C.Carter,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
43.57 /
2.50
|
Space group
|
H 3 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
182.786,
182.786,
354.234,
90.00,
90.00,
120.00
|
R / Rfree (%)
|
n/a /
n/a
|
Caesium Binding Sites:
The binding sites of Caesium atom in the Structure of Human Ferritin L Chain
(pdb code 2fg8). This binding sites where shown within
5.0 Angstroms radius around Caesium atom.
In total 10 binding sites of Caesium where determined in the
Structure of Human Ferritin L Chain, PDB code: 2fg8:
Jump to Caesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Caesium binding site 1 out
of 10 in 2fg8
Go back to
Caesium Binding Sites List in 2fg8
Caesium binding site 1 out
of 10 in the Structure of Human Ferritin L Chain
Mono view
Stereo pair view
|
A full contact list of Caesium with other atoms in the Cs binding
site number 1 of Structure of Human Ferritin L Chain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cs202
b:0.2
occ:1.00
|
OE1
|
C:GLU134
|
3.1
|
57.0
|
1.0
|
OE1
|
A:GLU134
|
3.4
|
51.4
|
1.0
|
OD1
|
C:ASP131
|
3.4
|
51.5
|
1.0
|
OD1
|
A:ASP131
|
3.4
|
46.7
|
1.0
|
CS
|
C:CS205
|
3.6
|
0.0
|
1.0
|
CS
|
A:CS204
|
4.2
|
0.0
|
1.0
|
CD
|
C:GLU134
|
4.3
|
56.3
|
1.0
|
CG
|
A:ASP131
|
4.4
|
45.4
|
1.0
|
CG
|
C:ASP131
|
4.5
|
50.8
|
1.0
|
CB
|
C:GLU134
|
4.5
|
48.9
|
1.0
|
CD
|
A:GLU134
|
4.6
|
51.2
|
1.0
|
CA
|
C:ASP131
|
4.7
|
45.1
|
1.0
|
CB
|
A:ASP131
|
4.7
|
42.5
|
1.0
|
CA
|
A:ASP131
|
4.8
|
41.4
|
1.0
|
CB
|
C:ASP131
|
4.8
|
47.9
|
1.0
|
CG
|
C:GLU134
|
5.0
|
53.2
|
1.0
|
|
Caesium binding site 2 out
of 10 in 2fg8
Go back to
Caesium Binding Sites List in 2fg8
Caesium binding site 2 out
of 10 in the Structure of Human Ferritin L Chain
Mono view
Stereo pair view
|
A full contact list of Caesium with other atoms in the Cs binding
site number 2 of Structure of Human Ferritin L Chain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cs204
b:0.0
occ:1.00
|
OE1
|
C:GLU134
|
3.0
|
57.0
|
1.0
|
OE1
|
A:GLU134
|
3.4
|
51.4
|
1.0
|
OE2
|
A:GLU134
|
3.6
|
54.3
|
1.0
|
OE2
|
C:GLU134
|
3.7
|
59.0
|
1.0
|
CD
|
C:GLU134
|
3.7
|
56.3
|
1.0
|
CD
|
A:GLU134
|
3.9
|
51.2
|
1.0
|
CS
|
A:CS202
|
4.2
|
0.2
|
1.0
|
|
Caesium binding site 3 out
of 10 in 2fg8
Go back to
Caesium Binding Sites List in 2fg8
Caesium binding site 3 out
of 10 in the Structure of Human Ferritin L Chain
Mono view
Stereo pair view
|
A full contact list of Caesium with other atoms in the Cs binding
site number 3 of Structure of Human Ferritin L Chain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cs205
b:0.0
occ:1.00
|
OG1
|
C:THR135
|
3.5
|
50.2
|
1.0
|
O
|
A:HOH440
|
3.5
|
88.3
|
1.0
|
CS
|
A:CS202
|
3.6
|
0.2
|
1.0
|
OD1
|
A:ASP131
|
3.8
|
46.7
|
1.0
|
OG1
|
A:THR135
|
3.8
|
49.2
|
1.0
|
OD1
|
C:ASP131
|
4.2
|
51.5
|
1.0
|
O
|
C:HOH441
|
4.4
|
45.2
|
1.0
|
CB
|
C:THR135
|
4.7
|
50.7
|
1.0
|
CG
|
A:ASP131
|
4.9
|
45.4
|
1.0
|
CA
|
C:THR135
|
5.0
|
49.7
|
1.0
|
|
Caesium binding site 4 out
of 10 in 2fg8
Go back to
Caesium Binding Sites List in 2fg8
Caesium binding site 4 out
of 10 in the Structure of Human Ferritin L Chain
Mono view
Stereo pair view
|
A full contact list of Caesium with other atoms in the Cs binding
site number 4 of Structure of Human Ferritin L Chain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cs203
b:0.0
occ:1.00
|
OD1
|
D:ASP131
|
3.2
|
43.5
|
1.0
|
O
|
H:HOH307
|
3.3
|
40.4
|
1.0
|
OG1
|
E:THR135
|
3.4
|
40.9
|
1.0
|
CS
|
E:CS201
|
3.8
|
0.4
|
1.0
|
OG1
|
D:THR135
|
3.9
|
41.1
|
1.0
|
OD1
|
E:ASP131
|
4.0
|
46.1
|
1.0
|
CG
|
D:ASP131
|
4.2
|
43.0
|
1.0
|
CB
|
E:THR135
|
4.4
|
37.5
|
1.0
|
OD2
|
D:ASP131
|
4.5
|
44.0
|
1.0
|
CA
|
E:THR135
|
4.6
|
37.5
|
1.0
|
CG2
|
E:THR135
|
4.6
|
35.6
|
1.0
|
O
|
E:HOH443
|
4.9
|
32.2
|
1.0
|
N
|
E:THR135
|
4.9
|
37.1
|
1.0
|
|
Caesium binding site 5 out
of 10 in 2fg8
Go back to
Caesium Binding Sites List in 2fg8
Caesium binding site 5 out
of 10 in the Structure of Human Ferritin L Chain
Mono view
Stereo pair view
|
A full contact list of Caesium with other atoms in the Cs binding
site number 5 of Structure of Human Ferritin L Chain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cs201
b:0.4
occ:1.00
|
OE1
|
D:GLU134
|
3.0
|
42.6
|
1.0
|
OD1
|
E:ASP131
|
3.2
|
46.1
|
1.0
|
OD1
|
H:ASP131
|
3.3
|
41.1
|
1.0
|
OE1
|
E:GLU134
|
3.4
|
47.9
|
1.0
|
OE1
|
H:GLU134
|
3.5
|
53.8
|
1.0
|
OD1
|
D:ASP131
|
3.7
|
43.5
|
1.0
|
O
|
H:HOH307
|
3.8
|
40.4
|
1.0
|
CS
|
D:CS203
|
3.8
|
0.0
|
1.0
|
CD
|
D:GLU134
|
4.2
|
40.8
|
1.0
|
CD
|
H:GLU134
|
4.3
|
52.2
|
1.0
|
CG
|
E:ASP131
|
4.3
|
43.4
|
1.0
|
CG
|
H:ASP131
|
4.3
|
40.1
|
1.0
|
CS
|
E:CS206
|
4.6
|
0.0
|
1.0
|
CA
|
H:ASP131
|
4.6
|
37.4
|
1.0
|
CD
|
E:GLU134
|
4.6
|
45.2
|
1.0
|
CB
|
H:ASP131
|
4.7
|
39.4
|
1.0
|
CB
|
D:GLU134
|
4.7
|
34.8
|
1.0
|
CB
|
H:GLU134
|
4.7
|
41.5
|
1.0
|
OE2
|
H:GLU134
|
4.7
|
54.8
|
1.0
|
CG
|
D:ASP131
|
4.8
|
43.0
|
1.0
|
CB
|
E:ASP131
|
5.0
|
40.3
|
1.0
|
OE2
|
D:GLU134
|
5.0
|
39.1
|
1.0
|
|
Caesium binding site 6 out
of 10 in 2fg8
Go back to
Caesium Binding Sites List in 2fg8
Caesium binding site 6 out
of 10 in the Structure of Human Ferritin L Chain
Mono view
Stereo pair view
|
A full contact list of Caesium with other atoms in the Cs binding
site number 6 of Structure of Human Ferritin L Chain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Cs206
b:0.0
occ:1.00
|
O
|
H:HOH442
|
3.1
|
55.8
|
1.0
|
OE2
|
E:GLU134
|
3.3
|
45.2
|
1.0
|
OE1
|
E:GLU134
|
3.6
|
47.9
|
1.0
|
OE2
|
H:GLU134
|
3.6
|
54.8
|
1.0
|
OE2
|
D:GLU134
|
3.8
|
39.1
|
1.0
|
CD
|
E:GLU134
|
3.8
|
45.2
|
1.0
|
OE1
|
D:GLU134
|
3.8
|
42.6
|
1.0
|
OE1
|
H:GLU134
|
3.9
|
53.8
|
1.0
|
CD
|
H:GLU134
|
4.2
|
52.2
|
1.0
|
CD
|
D:GLU134
|
4.2
|
40.8
|
1.0
|
CS
|
E:CS201
|
4.6
|
0.4
|
1.0
|
|
Caesium binding site 7 out
of 10 in 2fg8
Go back to
Caesium Binding Sites List in 2fg8
Caesium binding site 7 out
of 10 in the Structure of Human Ferritin L Chain
Mono view
Stereo pair view
|
A full contact list of Caesium with other atoms in the Cs binding
site number 7 of Structure of Human Ferritin L Chain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Cs207
b:0.4
occ:0.33
|
OE1
|
F:GLU134
|
3.0
|
49.4
|
1.0
|
OD1
|
F:ASP131
|
3.5
|
41.2
|
1.0
|
CS
|
F:CS208
|
3.7
|
0.6
|
0.3
|
CD
|
F:GLU134
|
4.0
|
47.1
|
1.0
|
OE2
|
F:GLU134
|
4.5
|
49.5
|
1.0
|
CG
|
F:ASP131
|
4.5
|
39.4
|
1.0
|
CB
|
F:ASP131
|
4.8
|
33.8
|
1.0
|
CA
|
F:ASP131
|
4.9
|
34.3
|
1.0
|
CS
|
F:CS209
|
4.9
|
0.1
|
0.3
|
CB
|
F:GLU134
|
5.0
|
37.8
|
1.0
|
|
Caesium binding site 8 out
of 10 in 2fg8
Go back to
Caesium Binding Sites List in 2fg8
Caesium binding site 8 out
of 10 in the Structure of Human Ferritin L Chain
Mono view
Stereo pair view
|
A full contact list of Caesium with other atoms in the Cs binding
site number 8 of Structure of Human Ferritin L Chain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Cs208
b:0.6
occ:0.33
|
OD1
|
F:ASP131
|
3.4
|
41.2
|
1.0
|
CS
|
F:CS207
|
3.7
|
0.4
|
0.3
|
OG1
|
F:THR135
|
4.1
|
38.8
|
1.0
|
CG
|
F:ASP131
|
4.6
|
39.4
|
1.0
|
OD2
|
F:ASP131
|
5.0
|
37.7
|
1.0
|
|
Caesium binding site 9 out
of 10 in 2fg8
Go back to
Caesium Binding Sites List in 2fg8
Caesium binding site 9 out
of 10 in the Structure of Human Ferritin L Chain
Mono view
Stereo pair view
|
A full contact list of Caesium with other atoms in the Cs binding
site number 9 of Structure of Human Ferritin L Chain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Cs209
b:0.1
occ:0.33
|
O
|
F:HOH363
|
3.8
|
44.4
|
1.0
|
OE2
|
F:GLU134
|
4.2
|
49.5
|
1.0
|
OE1
|
F:GLU134
|
4.9
|
49.4
|
1.0
|
CS
|
F:CS207
|
4.9
|
0.4
|
0.3
|
CD
|
F:GLU134
|
5.0
|
47.1
|
1.0
|
|
Caesium binding site 10 out
of 10 in 2fg8
Go back to
Caesium Binding Sites List in 2fg8
Caesium binding site 10 out
of 10 in the Structure of Human Ferritin L Chain
Mono view
Stereo pair view
|
A full contact list of Caesium with other atoms in the Cs binding
site number 10 of Structure of Human Ferritin L Chain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Cs210
b:0.4
occ:0.33
|
OD1
|
G:ASP131
|
3.3
|
63.6
|
1.0
|
OE1
|
G:GLU134
|
3.8
|
67.5
|
1.0
|
O
|
G:HOH447
|
3.9
|
49.8
|
0.3
|
CD
|
G:GLU134
|
4.1
|
66.5
|
1.0
|
OE2
|
G:GLU134
|
4.2
|
68.7
|
1.0
|
CG
|
G:ASP131
|
4.4
|
62.6
|
1.0
|
CB
|
G:GLU134
|
4.8
|
61.5
|
1.0
|
CA
|
G:ASP131
|
5.0
|
60.9
|
1.0
|
|
Reference:
Z.Wang,
C.Li,
M.Ellenburg,
E.Soistman,
J.Ruble,
B.Wright,
J.X.Ho,
D.C.Carter.
Structure of Human Ferritin L Chain. Acta Crystallogr.,Sect.D V. 62 800 2006.
ISSN: ISSN 0907-4449
PubMed: 16790936
DOI: 10.1107/S0907444906018294
Page generated: Tue Jul 30 20:17:40 2024
|