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Caesium in PDB 2fg8: Structure of Human Ferritin L Chain

Protein crystallography data

The structure of Structure of Human Ferritin L Chain, PDB code: 2fg8 was solved by Z.M.Wang, C.Li, M.P.Ellenburg, J.R.Ruble, J.X.Ho, D.C.Carter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.57 / 2.50
Space group H 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 182.786, 182.786, 354.234, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Caesium Binding Sites:

The binding sites of Caesium atom in the Structure of Human Ferritin L Chain (pdb code 2fg8). This binding sites where shown within 5.0 Angstroms radius around Caesium atom.
In total 10 binding sites of Caesium where determined in the Structure of Human Ferritin L Chain, PDB code: 2fg8:
Jump to Caesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Caesium binding site 1 out of 10 in 2fg8

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Caesium binding site 1 out of 10 in the Structure of Human Ferritin L Chain


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 1 of Structure of Human Ferritin L Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs202

b:0.2
occ:1.00
 OE1 C:GLU134 3.1 57.0 1.0
OE1 A:GLU134 3.4 51.4 1.0
OD1 C:ASP131 3.4 51.5 1.0
OD1 A:ASP131 3.4 46.7 1.0
CS C:CS205 3.6 0.0 1.0
CS A:CS204 4.2 0.0 1.0
CD C:GLU134 4.3 56.3 1.0
CG A:ASP131 4.4 45.4 1.0
CG C:ASP131 4.5 50.8 1.0
CB C:GLU134 4.5 48.9 1.0
CD A:GLU134 4.6 51.2 1.0
CA C:ASP131 4.7 45.1 1.0
CB A:ASP131 4.7 42.5 1.0
CA A:ASP131 4.8 41.4 1.0
CB C:ASP131 4.8 47.9 1.0
CG C:GLU134 5.0 53.2 1.0

Caesium binding site 2 out of 10 in 2fg8

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Caesium binding site 2 out of 10 in the Structure of Human Ferritin L Chain


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 2 of Structure of Human Ferritin L Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs204

b:0.0
occ:1.00
 OE1 C:GLU134 3.0 57.0 1.0
OE1 A:GLU134 3.4 51.4 1.0
OE2 A:GLU134 3.6 54.3 1.0
OE2 C:GLU134 3.7 59.0 1.0
CD C:GLU134 3.7 56.3 1.0
CD A:GLU134 3.9 51.2 1.0
CS A:CS202 4.2 0.2 1.0

Caesium binding site 3 out of 10 in 2fg8

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Caesium binding site 3 out of 10 in the Structure of Human Ferritin L Chain


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 3 of Structure of Human Ferritin L Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cs205

b:0.0
occ:1.00
 OG1 C:THR135 3.5 50.2 1.0
O A:HOH440 3.5 88.3 1.0
CS A:CS202 3.6 0.2 1.0
OD1 A:ASP131 3.8 46.7 1.0
OG1 A:THR135 3.8 49.2 1.0
OD1 C:ASP131 4.2 51.5 1.0
O C:HOH441 4.4 45.2 1.0
CB C:THR135 4.7 50.7 1.0
CG A:ASP131 4.9 45.4 1.0
CA C:THR135 5.0 49.7 1.0

Caesium binding site 4 out of 10 in 2fg8

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Caesium binding site 4 out of 10 in the Structure of Human Ferritin L Chain


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 4 of Structure of Human Ferritin L Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cs203

b:0.0
occ:1.00
 OD1 D:ASP131 3.2 43.5 1.0
O H:HOH307 3.3 40.4 1.0
OG1 E:THR135 3.4 40.9 1.0
CS E:CS201 3.8 0.4 1.0
OG1 D:THR135 3.9 41.1 1.0
OD1 E:ASP131 4.0 46.1 1.0
CG D:ASP131 4.2 43.0 1.0
CB E:THR135 4.4 37.5 1.0
OD2 D:ASP131 4.5 44.0 1.0
CA E:THR135 4.6 37.5 1.0
CG2 E:THR135 4.6 35.6 1.0
O E:HOH443 4.9 32.2 1.0
N E:THR135 4.9 37.1 1.0

Caesium binding site 5 out of 10 in 2fg8

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Caesium binding site 5 out of 10 in the Structure of Human Ferritin L Chain


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 5 of Structure of Human Ferritin L Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cs201

b:0.4
occ:1.00
 OE1 D:GLU134 3.0 42.6 1.0
OD1 E:ASP131 3.2 46.1 1.0
OD1 H:ASP131 3.3 41.1 1.0
OE1 E:GLU134 3.4 47.9 1.0
OE1 H:GLU134 3.5 53.8 1.0
OD1 D:ASP131 3.7 43.5 1.0
O H:HOH307 3.8 40.4 1.0
CS D:CS203 3.8 0.0 1.0
CD D:GLU134 4.2 40.8 1.0
CD H:GLU134 4.3 52.2 1.0
CG E:ASP131 4.3 43.4 1.0
CG H:ASP131 4.3 40.1 1.0
CS E:CS206 4.6 0.0 1.0
CA H:ASP131 4.6 37.4 1.0
CD E:GLU134 4.6 45.2 1.0
CB H:ASP131 4.7 39.4 1.0
CB D:GLU134 4.7 34.8 1.0
CB H:GLU134 4.7 41.5 1.0
OE2 H:GLU134 4.7 54.8 1.0
CG D:ASP131 4.8 43.0 1.0
CB E:ASP131 5.0 40.3 1.0
OE2 D:GLU134 5.0 39.1 1.0

Caesium binding site 6 out of 10 in 2fg8

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Caesium binding site 6 out of 10 in the Structure of Human Ferritin L Chain


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 6 of Structure of Human Ferritin L Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cs206

b:0.0
occ:1.00
 O H:HOH442 3.1 55.8 1.0
OE2 E:GLU134 3.3 45.2 1.0
OE1 E:GLU134 3.6 47.9 1.0
OE2 H:GLU134 3.6 54.8 1.0
OE2 D:GLU134 3.8 39.1 1.0
CD E:GLU134 3.8 45.2 1.0
OE1 D:GLU134 3.8 42.6 1.0
OE1 H:GLU134 3.9 53.8 1.0
CD H:GLU134 4.2 52.2 1.0
CD D:GLU134 4.2 40.8 1.0
CS E:CS201 4.6 0.4 1.0

Caesium binding site 7 out of 10 in 2fg8

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Caesium binding site 7 out of 10 in the Structure of Human Ferritin L Chain


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 7 of Structure of Human Ferritin L Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cs207

b:0.4
occ:0.33
 OE1 F:GLU134 3.0 49.4 1.0
OD1 F:ASP131 3.5 41.2 1.0
CS F:CS208 3.7 0.6 0.3
CD F:GLU134 4.0 47.1 1.0
OE2 F:GLU134 4.5 49.5 1.0
CG F:ASP131 4.5 39.4 1.0
CB F:ASP131 4.8 33.8 1.0
CA F:ASP131 4.9 34.3 1.0
CS F:CS209 4.9 0.1 0.3
CB F:GLU134 5.0 37.8 1.0

Caesium binding site 8 out of 10 in 2fg8

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Caesium binding site 8 out of 10 in the Structure of Human Ferritin L Chain


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 8 of Structure of Human Ferritin L Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cs208

b:0.6
occ:0.33
 OD1 F:ASP131 3.4 41.2 1.0
CS F:CS207 3.7 0.4 0.3
OG1 F:THR135 4.1 38.8 1.0
CG F:ASP131 4.6 39.4 1.0
OD2 F:ASP131 5.0 37.7 1.0

Caesium binding site 9 out of 10 in 2fg8

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Caesium binding site 9 out of 10 in the Structure of Human Ferritin L Chain


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 9 of Structure of Human Ferritin L Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cs209

b:0.1
occ:0.33
 O F:HOH363 3.8 44.4 1.0
OE2 F:GLU134 4.2 49.5 1.0
OE1 F:GLU134 4.9 49.4 1.0
CS F:CS207 4.9 0.4 0.3
CD F:GLU134 5.0 47.1 1.0

Caesium binding site 10 out of 10 in 2fg8

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Caesium binding site 10 out of 10 in the Structure of Human Ferritin L Chain


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 10 of Structure of Human Ferritin L Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Cs210

b:0.4
occ:0.33
 OD1 G:ASP131 3.3 63.6 1.0
OE1 G:GLU134 3.8 67.5 1.0
O G:HOH447 3.9 49.8 0.3
CD G:GLU134 4.1 66.5 1.0
OE2 G:GLU134 4.2 68.7 1.0
CG G:ASP131 4.4 62.6 1.0
CB G:GLU134 4.8 61.5 1.0
CA G:ASP131 5.0 60.9 1.0

Reference:

Z.Wang, C.Li, M.Ellenburg, E.Soistman, J.Ruble, B.Wright, J.X.Ho, D.C.Carter. Structure of Human Ferritin L Chain. Acta Crystallogr.,Sect.D V. 62 800 2006.
ISSN: ISSN 0907-4449
PubMed: 16790936
DOI: 10.1107/S0907444906018294
Page generated: Tue Jul 30 20:17:40 2024

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