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Caesium in PDB 1sk1: Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli

Enzymatic activity of Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli

All present enzymatic activity of Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli:
1.20.4.1;

Protein crystallography data

The structure of Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli, PDB code: 1sk1 was solved by S.Demel, B.F.Edwards, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.55
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 86.680, 86.680, 116.060, 90.00, 90.00, 120.00
R / Rfree (%) 17.6 / 21.2

Other elements in 1sk1:

The structure of Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli also contains other interesting chemical elements:

Arsenic (As) 1 atom

Caesium Binding Sites:

The binding sites of Caesium atom in the Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli (pdb code 1sk1). This binding sites where shown within 5.0 Angstroms radius around Caesium atom.
In total 3 binding sites of Caesium where determined in the Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli, PDB code: 1sk1:
Jump to Caesium binding site number: 1; 2; 3;

Caesium binding site 1 out of 3 in 1sk1

Go back to Caesium Binding Sites List in 1sk1
Caesium binding site 1 out of 3 in the Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 1 of Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs401

b:15.7
occ:0.52
O A:LEU116 3.1 15.4 1.0
O A:LEU113 3.2 17.4 1.0
O A:ASP114 3.2 16.3 1.0
O A:HOH1026 3.3 15.6 1.0
C A:ASP114 3.8 17.1 1.0
O A:HOH1002 4.2 14.7 1.0
C A:LEU116 4.2 12.7 1.0
CA A:ASP114 4.3 12.9 1.0
C A:LEU113 4.3 16.1 1.0
CD1 A:LEU101 4.5 16.8 1.0
N A:LEU116 4.6 15.9 1.0
N A:ILE115 4.6 14.5 1.0
N A:ASP114 4.9 12.6 1.0
C A:ILE115 4.9 12.5 1.0
CA A:LEU116 5.0 12.3 1.0
CA A:ILE115 5.0 12.3 1.0

Caesium binding site 2 out of 3 in 1sk1

Go back to Caesium Binding Sites List in 1sk1
Caesium binding site 2 out of 3 in the Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 2 of Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs402

b:25.1
occ:0.37
O A:HOH1123 3.1 30.9 1.0
O A:HOH1052 3.1 17.4 1.0
O A:HOH1033 3.3 16.0 1.0
OD2 A:ASP128 3.4 19.2 1.0
O A:HOH1043 3.7 18.7 1.0
CG A:ASP128 4.3 19.5 1.0
O A:HOH1005 4.3 13.9 1.0
O A:HOH1081 4.4 32.1 1.0
O A:HOH1176 4.5 32.1 1.0
CB A:ASP128 4.6 15.2 1.0
O1 A:SO4203 4.8 14.6 0.7
O4 A:SO4203 4.9 11.2 0.7

Caesium binding site 3 out of 3 in 1sk1

Go back to Caesium Binding Sites List in 1sk1
Caesium binding site 3 out of 3 in the Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 3 of Arsenate Reductase R60K Mutant +0.4M Arsenate From E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs403

b:46.9
occ:0.37
O A:PRO38 3.0 22.7 1.0
O A:HOH1032 3.1 22.3 1.0
OE1 A:GLU43 3.2 13.9 0.6
O A:HOH1141 3.3 35.6 1.0
N A:SER40 3.6 19.1 1.0
CA A:PRO39 3.9 22.0 1.0
C A:PRO39 3.9 23.4 1.0
C A:PRO38 4.0 18.3 1.0
CD A:GLU43 4.1 37.6 0.6
O A:HOH1049 4.2 22.9 1.0
O A:HOH1267 4.2 32.1 1.0
OE2 A:GLU43 4.3 43.1 0.6
N A:PRO39 4.4 21.4 1.0
CA A:SER40 4.6 19.6 1.0
CB A:SER40 4.7 20.9 1.0
O A:PRO39 4.8 18.5 1.0
O A:ASN37 4.9 22.0 1.0

Reference:

S.Demel, J.Shi, P.Martin, B.P.Rosen, B.F.Edwards. Arginine 60 in the Arsc Arsenate Reductase of E. Coli Plasmid R773 Determines the Chemical Nature of the Bound As(III) Product. Protein Sci. V. 13 2330 2004.
ISSN: ISSN 0961-8368
PubMed: 15295115
DOI: 10.1110/PS.04787204
Page generated: Tue Jul 30 20:14:50 2024

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