Atomistry » Caesium » PDB 1av2-2j9x » 1j9b
Atomistry »
  Caesium »
    PDB 1av2-2j9x »
      1j9b »

Caesium in PDB 1j9b: Arsenate Reductase+0.4M Arsenite From E. Coli

Protein crystallography data

The structure of Arsenate Reductase+0.4M Arsenite From E. Coli, PDB code: 1j9b was solved by P.Martin, B.F.Edwards, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.26
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 86.613, 86.613, 116.672, 90.00, 90.00, 120.00
R / Rfree (%) 14.7 / 18.8

Other elements in 1j9b:

The structure of Arsenate Reductase+0.4M Arsenite From E. Coli also contains other interesting chemical elements:

Arsenic (As) 3 atoms

Caesium Binding Sites:

The binding sites of Caesium atom in the Arsenate Reductase+0.4M Arsenite From E. Coli (pdb code 1j9b). This binding sites where shown within 5.0 Angstroms radius around Caesium atom.
In total 3 binding sites of Caesium where determined in the Arsenate Reductase+0.4M Arsenite From E. Coli, PDB code: 1j9b:
Jump to Caesium binding site number: 1; 2; 3;

Caesium binding site 1 out of 3 in 1j9b

Go back to Caesium Binding Sites List in 1j9b
Caesium binding site 1 out of 3 in the Arsenate Reductase+0.4M Arsenite From E. Coli


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 1 of Arsenate Reductase+0.4M Arsenite From E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs302

b:9.4
occ:0.43
O A:LEU116 3.1 12.0 1.0
O A:LEU113 3.1 12.2 1.0
O A:ASP114 3.3 12.2 1.0
O A:HOH1012 3.3 12.0 1.0
C A:ASP114 3.8 11.7 1.0
O A:HOH1006 4.2 10.9 1.0
C A:LEU116 4.3 11.2 1.0
CA A:ASP114 4.3 11.5 1.0
C A:LEU113 4.3 11.0 1.0
CD1 A:LEU101 4.5 15.5 1.0
N A:LEU116 4.6 10.7 1.0
N A:ILE115 4.6 10.4 1.0
N A:ASP114 4.8 11.2 1.0
C A:ILE115 5.0 10.1 1.0

Caesium binding site 2 out of 3 in 1j9b

Go back to Caesium Binding Sites List in 1j9b
Caesium binding site 2 out of 3 in the Arsenate Reductase+0.4M Arsenite From E. Coli


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 2 of Arsenate Reductase+0.4M Arsenite From E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs303

b:23.4
occ:0.23
O A:HOH1046 3.2 19.2 1.0
O A:HOH1043 3.3 16.2 1.0
O A:HOH1249 3.5 51.7 1.0
O A:HOH1117 3.5 32.8 1.0
OD2 A:ASP128 3.6 19.5 1.0
O A:HOH1032 3.8 15.4 1.0
O A:HOH1254 3.9 43.5 0.5
CG A:ASP128 4.3 15.6 1.0
O A:HOH1001 4.4 12.4 1.0
OE2 A:GLU130 4.6 17.2 0.4
CB A:ASP128 4.7 12.7 1.0
O1 A:SO4204 4.9 15.1 0.7
O4 A:SO4204 4.9 8.4 0.7

Caesium binding site 3 out of 3 in 1j9b

Go back to Caesium Binding Sites List in 1j9b
Caesium binding site 3 out of 3 in the Arsenate Reductase+0.4M Arsenite From E. Coli


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 3 of Arsenate Reductase+0.4M Arsenite From E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs304

b:27.6
occ:0.19
O A:HOH1215 3.0 54.0 1.0
OE1 A:GLU43 3.1 15.7 0.6
O A:PRO38 3.1 17.6 1.0
O A:HOH1027 3.2 21.5 1.0
O A:HOH1110 3.4 35.8 1.0
N A:SER40 3.8 16.5 1.0
CA A:PRO39 4.1 17.4 1.0
CD A:GLU43 4.1 21.3 0.6
C A:PRO39 4.1 17.6 1.0
C A:PRO38 4.1 16.9 1.0
OE2 A:GLU43 4.1 26.5 0.6
O A:HOH1031 4.2 20.5 1.0
O A:HOH1190 4.5 31.1 1.0
N A:PRO39 4.6 17.4 1.0
CB A:SER40 4.7 20.5 1.0
CA A:SER40 4.7 16.1 1.0
O A:ASN37 4.9 17.8 1.0
O A:PRO39 5.0 18.0 1.0

Reference:

P.Martin, S.Demel, J.Shi, T.Gladysheva, D.L.Gatti, B.P.Rosen, B.F.Edwards. Insights Into the Structure, Solvation, and Mechanism of Arsc Arsenate Reductase, A Novel Arsenic Detoxification Enzyme. Structure V. 9 1071 2001.
ISSN: ISSN 0969-2126
PubMed: 11709171
DOI: 10.1016/S0969-2126(01)00672-4
Page generated: Tue Jul 30 20:09:01 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy