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Caesium in PDB 6l7g: Metallo Beta-Lactamase Fold Protein (Camp Bound)

Protein crystallography data

The structure of Metallo Beta-Lactamase Fold Protein (Camp Bound), PDB code: 6l7g was solved by K.-Y.Lee, D.-G.Kim, B.-J.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.85 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 70.734, 121.521, 187.256, 90, 90, 90
R / Rfree (%) 17.7 / 20.8

Other elements in 6l7g:

The structure of Metallo Beta-Lactamase Fold Protein (Camp Bound) also contains other interesting chemical elements:

Nickel (Ni) 12 atoms
Zinc (Zn) 12 atoms

Caesium Binding Sites:

The binding sites of Caesium atom in the Metallo Beta-Lactamase Fold Protein (Camp Bound) (pdb code 6l7g). This binding sites where shown within 5.0 Angstroms radius around Caesium atom.
In total 6 binding sites of Caesium where determined in the Metallo Beta-Lactamase Fold Protein (Camp Bound), PDB code: 6l7g:
Jump to Caesium binding site number: 1; 2; 3; 4; 5; 6;

Caesium binding site 1 out of 6 in 6l7g

Go back to Caesium Binding Sites List in 6l7g
Caesium binding site 1 out of 6 in the Metallo Beta-Lactamase Fold Protein (Camp Bound)


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 1 of Metallo Beta-Lactamase Fold Protein (Camp Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cs302

b:55.9
occ:1.00
 O A:ILE26 3.0 28.4 1.0
O A:CYS32 3.1 34.5 1.0
O A:ASN29 3.2 30.0 1.0
O A:LEU34 3.5 27.7 1.0
C A:ILE26 4.0 29.6 1.0
C A:CYS32 4.0 36.3 1.0
CB A:CYS32 4.1 28.1 1.0
C A:ASN29 4.2 31.3 1.0
O A:SER27 4.4 35.2 1.0
CA A:CYS32 4.5 29.6 1.0
CA A:SER27 4.6 30.9 1.0
N A:CYS32 4.6 28.2 1.0
CG2 A:ILE26 4.6 29.9 1.0
O A:PRO30 4.6 38.2 1.0
C A:SER27 4.7 33.1 1.0
CA A:PRO30 4.7 39.9 1.0
N A:SER27 4.7 30.6 1.0
C A:LEU34 4.7 29.5 1.0
C A:PRO30 4.8 38.6 1.0
N A:PRO30 4.9 36.9 1.0
SG A:CYS32 4.9 31.1 1.0
CA A:ILE26 4.9 28.3 1.0
O A:HOH485 4.9 34.1 1.0

Caesium binding site 2 out of 6 in 6l7g

Go back to Caesium Binding Sites List in 6l7g
Caesium binding site 2 out of 6 in the Metallo Beta-Lactamase Fold Protein (Camp Bound)


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 2 of Metallo Beta-Lactamase Fold Protein (Camp Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cs302

b:50.9
occ:1.00
 O B:CYS32 3.0 29.6 1.0
O B:ILE26 3.0 24.7 1.0
O B:ASN29 3.2 27.1 1.0
O B:LEU34 3.6 29.3 1.0
C B:CYS32 4.0 29.2 1.0
C B:ILE26 4.0 24.9 1.0
O B:HOH484 4.2 41.5 1.0
C B:ASN29 4.2 25.8 1.0
CB B:CYS32 4.2 24.9 1.0
O B:SER27 4.4 28.8 1.0
CA B:CYS32 4.4 26.9 1.0
CG2 B:ILE26 4.6 27.5 1.0
N B:CYS32 4.6 25.4 1.0
CA B:PRO30 4.6 30.0 1.0
CA B:SER27 4.6 26.2 1.0
O B:PRO30 4.6 30.8 1.0
C B:SER27 4.7 28.2 1.0
O B:HOH548 4.7 27.6 1.0
C B:PRO30 4.7 29.3 1.0
N B:SER27 4.8 24.2 1.0
N B:PRO30 4.8 29.3 1.0
C B:LEU34 4.8 25.1 1.0
SG B:CYS32 4.8 27.1 1.0
CA B:ILE26 4.9 24.0 1.0
N B:ASN29 5.0 26.9 1.0

Caesium binding site 3 out of 6 in 6l7g

Go back to Caesium Binding Sites List in 6l7g
Caesium binding site 3 out of 6 in the Metallo Beta-Lactamase Fold Protein (Camp Bound)


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 3 of Metallo Beta-Lactamase Fold Protein (Camp Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cs302

b:61.6
occ:1.00
 O C:ILE26 3.0 30.9 1.0
O C:CYS32 3.2 40.1 1.0
O C:ASN29 3.3 34.7 1.0
O C:LEU34 3.4 35.2 1.0
C C:CYS32 4.0 38.8 1.0
C C:ILE26 4.0 33.5 1.0
CB C:CYS32 4.2 29.2 1.0
C C:ASN29 4.3 34.0 1.0
CA C:CYS32 4.5 32.4 1.0
O C:SER27 4.5 38.0 1.0
O C:HOH508 4.6 40.3 1.0
N C:CYS32 4.6 32.4 1.0
CG2 C:ILE26 4.6 34.4 1.0
C C:LEU34 4.6 35.9 1.0
CA C:SER27 4.7 37.7 1.0
CA C:PRO30 4.7 39.8 1.0
C C:SER27 4.8 40.0 1.0
C C:PRO30 4.8 40.1 1.0
N C:SER27 4.8 33.3 1.0
O C:PRO30 4.8 38.2 1.0
SG C:CYS32 4.9 31.9 1.0
N C:PRO30 4.9 38.1 1.0
CA C:ILE26 4.9 32.6 1.0

Caesium binding site 4 out of 6 in 6l7g

Go back to Caesium Binding Sites List in 6l7g
Caesium binding site 4 out of 6 in the Metallo Beta-Lactamase Fold Protein (Camp Bound)


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 4 of Metallo Beta-Lactamase Fold Protein (Camp Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cs302

b:54.7
occ:1.00
 O D:ILE26 3.0 26.4 1.0
O D:CYS32 3.1 33.0 1.0
O D:ASN29 3.2 28.6 1.0
O D:LEU34 3.6 29.6 1.0
C D:ILE26 4.0 27.4 1.0
C D:CYS32 4.1 30.5 1.0
C D:ASN29 4.2 32.7 1.0
CB D:CYS32 4.3 27.4 1.0
O D:HOH533 4.5 36.3 1.0
CA D:PRO30 4.5 35.2 1.0
CA D:CYS32 4.5 28.6 1.0
N D:CYS32 4.6 29.6 1.0
O D:SER27 4.6 32.3 1.0
CA D:SER27 4.6 30.5 1.0
O D:HOH529 4.6 33.0 1.0
CG2 D:ILE26 4.6 28.9 1.0
O D:PRO30 4.7 36.6 1.0
C D:PRO30 4.7 36.1 1.0
C D:SER27 4.8 32.8 1.0
N D:SER27 4.8 27.1 1.0
C D:LEU34 4.8 28.4 1.0
N D:PRO30 4.8 37.6 1.0
SG D:CYS32 4.9 27.9 1.0
CA D:ILE26 4.9 24.8 1.0

Caesium binding site 5 out of 6 in 6l7g

Go back to Caesium Binding Sites List in 6l7g
Caesium binding site 5 out of 6 in the Metallo Beta-Lactamase Fold Protein (Camp Bound)


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 5 of Metallo Beta-Lactamase Fold Protein (Camp Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cs302

b:60.7
occ:1.00
 O E:ILE26 3.0 27.2 1.0
O E:CYS32 3.1 30.0 1.0
O E:ASN29 3.2 29.3 1.0
O E:LEU34 3.5 27.2 1.0
C E:ILE26 4.0 28.6 1.0
C E:CYS32 4.1 32.0 1.0
CB E:CYS32 4.2 27.7 1.0
C E:ASN29 4.2 28.6 1.0
CG2 E:ILE26 4.5 29.5 1.0
CA E:CYS32 4.5 27.3 1.0
CA E:PRO30 4.5 31.7 1.0
CA E:SER27 4.5 28.5 1.0
O E:SER27 4.6 32.6 1.0
N E:CYS32 4.6 28.8 1.0
C E:SER27 4.7 32.1 1.0
C E:LEU34 4.7 27.2 1.0
O E:PRO30 4.7 35.3 1.0
C E:PRO30 4.7 33.8 1.0
N E:SER27 4.7 29.0 1.0
O E:HOH519 4.8 31.6 1.0
N E:PRO30 4.8 31.4 1.0
CA E:ILE26 4.9 26.7 1.0
SG E:CYS32 4.9 27.7 1.0
O E:HOH457 4.9 43.8 1.0

Caesium binding site 6 out of 6 in 6l7g

Go back to Caesium Binding Sites List in 6l7g
Caesium binding site 6 out of 6 in the Metallo Beta-Lactamase Fold Protein (Camp Bound)


Mono view


Stereo pair view

A full contact list of Caesium with other atoms in the Cs binding site number 6 of Metallo Beta-Lactamase Fold Protein (Camp Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cs302

b:64.3
occ:1.00
 O F:ILE26 3.0 29.9 1.0
O F:CYS32 3.1 33.4 1.0
O F:ASN29 3.2 29.4 1.0
O F:LEU34 3.6 31.8 1.0
C F:ILE26 4.0 28.9 1.0
C F:CYS32 4.1 34.7 1.0
CB F:CYS32 4.2 28.6 1.0
C F:ASN29 4.2 31.7 1.0
CA F:CYS32 4.5 30.8 1.0
O F:HOH476 4.5 40.0 1.0
CA F:SER27 4.5 31.9 1.0
O F:SER27 4.5 36.7 1.0
N F:CYS32 4.5 33.6 1.0
CA F:PRO30 4.6 40.7 1.0
O F:PRO30 4.7 39.1 1.0
CG2 F:ILE26 4.7 31.4 1.0
C F:SER27 4.7 32.5 1.0
N F:SER27 4.8 29.5 1.0
C F:PRO30 4.8 42.6 1.0
C F:LEU34 4.8 32.1 1.0
N F:PRO30 4.8 37.4 1.0
O F:HOH505 4.9 41.1 1.0
CA F:ILE26 4.9 26.5 1.0
SG F:CYS32 4.9 29.8 1.0

Reference:

K.-Y.Lee, D.-G.Kim, B.-J.Lee. Metallo Beta-Lactamase Fold Protein To Be Published.
Page generated: Wed Mar 3 13:04:36 2021

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